Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.34■□□□□ 0.21
HPS4Q9NQG7 AL033527.4-201ENST00000641026 673 ntBASIC16.34■□□□□ 0.21
HPS4Q9NQG7 AC026691.1-201ENST00000602502 2017 ntBASIC16.34■□□□□ 0.21
HPS4Q9NQG7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HPS4Q9NQG7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HPS4Q9NQG7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HPS4Q9NQG7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HPS4Q9NQG7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
HPS4Q9NQG7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HPS4Q9NQG7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HPS4Q9NQG7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HPS4Q9NQG7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HPS4Q9NQG7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.33■□□□□ 0.2
HPS4Q9NQG7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 FAM86LP-201ENST00000478302 853 ntBASIC16.33■□□□□ 0.2
HPS4Q9NQG7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 BRI3BPP1-201ENST00000594224 787 ntBASIC16.33■□□□□ 0.2
HPS4Q9NQG7 AC133552.6-201ENST00000613406 534 ntBASIC16.33■□□□□ 0.2
HPS4Q9NQG7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HPS4Q9NQG7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 KRT8P22-201ENST00000562317 1415 ntBASIC16.32■□□□□ 0.2
HPS4Q9NQG7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 AL359711.2-201ENST00000563105 872 ntBASIC16.32■□□□□ 0.2
HPS4Q9NQG7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 AC233724.13-201ENST00000598383 410 ntBASIC16.32■□□□□ 0.2
HPS4Q9NQG7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 AC133539.2-201ENST00000604757 467 ntBASIC16.32■□□□□ 0.2
HPS4Q9NQG7 AC018665.1-201ENST00000622927 1362 ntBASIC16.32■□□□□ 0.2
HPS4Q9NQG7 CU634019.7-201ENST00000624153 1185 ntBASIC16.32■□□□□ 0.2
HPS4Q9NQG7 FP236241.2-201ENST00000624906 1185 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms