Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 KRT18P32-201ENST00000424695 1287 ntBASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 KRT8P23-201ENST00000560090 1207 ntBASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 AC013467.2-201ENST00000605472 835 ntBASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TIMMDC1Q9NPL8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 AC006277.1-201ENST00000624348 1610 ntBASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 CICP23-201ENST00000605013 2741 ntBASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 HLA-J-203ENST00000494367 1087 ntBASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 AC009093.7-201ENST00000623853 1223 ntBASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 LINC00628-201ENST00000628516 1289 ntBASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMMDC1Q9NPL8 UXT-AS1-201ENST00000590504 1525 ntBASIC15.27■□□□□ 0.04
TIMMDC1Q9NPL8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TIMMDC1Q9NPL8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms