Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.66■□□□□ 0.1
SSU72Q9NP77 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.66■□□□□ 0.1
SSU72Q9NP77 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.66■□□□□ 0.1
SSU72Q9NP77 AC009947.1-201ENST00000444350 727 ntBASIC15.66■□□□□ 0.1
SSU72Q9NP77 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.66■□□□□ 0.1
SSU72Q9NP77 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.66■□□□□ 0.1
SSU72Q9NP77 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.66■□□□□ 0.1
SSU72Q9NP77 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.66■□□□□ 0.1
SSU72Q9NP77 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSU72Q9NP77 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSU72Q9NP77 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSU72Q9NP77 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSU72Q9NP77 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SSU72Q9NP77 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSU72Q9NP77 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.66■□□□□ 0.1
SSU72Q9NP77 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSU72Q9NP77 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SSU72Q9NP77 AC007686.3-201ENST00000619017 3487 ntBASIC15.66■□□□□ 0.1
SSU72Q9NP77 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.66■□□□□ 0.1
SSU72Q9NP77 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SSU72Q9NP77 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 HSPA7-201ENST00000445535 1927 ntBASIC15.65■□□□□ 0.1
SSU72Q9NP77 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 GHSR-202ENST00000427970 912 ntBASIC15.65■□□□□ 0.1
SSU72Q9NP77 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 AC092910.1-201ENST00000482027 1129 ntBASIC15.65■□□□□ 0.1
SSU72Q9NP77 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 AC084364.1-201ENST00000551967 1556 ntBASIC15.65■□□□□ 0.1
SSU72Q9NP77 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSU72Q9NP77 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SSU72Q9NP77 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.64■□□□□ 0.1
SSU72Q9NP77 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSU72Q9NP77 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSU72Q9NP77 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSU72Q9NP77 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSU72Q9NP77 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSU72Q9NP77 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSU72Q9NP77 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSU72Q9NP77 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 AL139010.1-201ENST00000454878 894 ntBASIC15.64■□□□□ 0.09
SSU72Q9NP77 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSU72Q9NP77 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 KRT18P35-201ENST00000510488 1269 ntBASIC15.64■□□□□ 0.09
SSU72Q9NP77 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 AL138918.1-201ENST00000568306 659 ntBASIC15.64■□□□□ 0.09
SSU72Q9NP77 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSU72Q9NP77 AL031008.1-201ENST00000619963 541 ntBASIC15.64■□□□□ 0.09
SSU72Q9NP77 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSU72Q9NP77 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSU72Q9NP77 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SSU72Q9NP77 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms