Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 AL589702.1-201ENST00000641229 1509 ntBASIC15.17■□□□□ 0.02
PIF1Q9H611 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.17■□□□□ 0.02
PIF1Q9H611 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PIF1Q9H611 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.17■□□□□ 0.02
PIF1Q9H611 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.17■□□□□ 0.02
PIF1Q9H611 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.17■□□□□ 0.02
PIF1Q9H611 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 IGHV3-22-201ENST00000520721 359 ntBASIC15.17■□□□□ 0.02
PIF1Q9H611 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.17■□□□□ 0.02
PIF1Q9H611 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.17■□□□□ 0.02
PIF1Q9H611 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PIF1Q9H611 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
PIF1Q9H611 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
PIF1Q9H611 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PIF1Q9H611 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.17■□□□□ 0.02
PIF1Q9H611 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.17■□□□□ 0.02
PIF1Q9H611 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIF1Q9H611 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.17■□□□□ 0.02
PIF1Q9H611 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.17■□□□□ 0.02
PIF1Q9H611 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PIF1Q9H611 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PIF1Q9H611 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.16■□□□□ 0.02
PIF1Q9H611 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.16■□□□□ 0.02
PIF1Q9H611 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PIF1Q9H611 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.16■□□□□ 0.02
PIF1Q9H611 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.16■□□□□ 0.02
PIF1Q9H611 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 AC079776.4-201ENST00000511039 504 ntBASIC15.16■□□□□ 0.02
PIF1Q9H611 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.16■□□□□ 0.02
PIF1Q9H611 AC145285.3-201ENST00000564603 959 ntBASIC15.16■□□□□ 0.02
PIF1Q9H611 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 AL121894.2-201ENST00000602977 491 ntBASIC15.16■□□□□ 0.02
PIF1Q9H611 AL009183.1-201ENST00000603760 355 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms