Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK3Q9H422 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK3Q9H422 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK3Q9H422 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK3Q9H422 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK3Q9H422 AL133267.1-201ENST00000398220 340 ntBASIC17.14■□□□□ 0.33
HIPK3Q9H422 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.14■□□□□ 0.33
HIPK3Q9H422 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK3Q9H422 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK3Q9H422 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK3Q9H422 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK3Q9H422 AC015818.8-201ENST00000587907 1519 ntBASIC17.14■□□□□ 0.33
HIPK3Q9H422 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HIPK3Q9H422 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK3Q9H422 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK3Q9H422 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 BX284668.4-201ENST00000453917 508 ntBASIC17.13■□□□□ 0.33
HIPK3Q9H422 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 AC006453.4-201ENST00000636949 1252 ntBASIC17.13■□□□□ 0.33
HIPK3Q9H422 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 AP001094.4-201ENST00000579008 2176 ntBASIC17.13■□□□□ 0.33
HIPK3Q9H422 AC005052.1-201ENST00000625181 2492 ntBASIC17.13■□□□□ 0.33
HIPK3Q9H422 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK3Q9H422 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HIPK3Q9H422 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.12■□□□□ 0.33
HIPK3Q9H422 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HIPK3Q9H422 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.12■□□□□ 0.33
HIPK3Q9H422 AL662890.1-201ENST00000396818 632 ntBASIC17.12■□□□□ 0.33
HIPK3Q9H422 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.12■□□□□ 0.33
HIPK3Q9H422 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.12■□□□□ 0.33
HIPK3Q9H422 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.12■□□□□ 0.33
HIPK3Q9H422 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.12■□□□□ 0.33
HIPK3Q9H422 AC015967.2-201ENST00000624092 234 ntBASIC17.12■□□□□ 0.33
HIPK3Q9H422 AC006435.4-201ENST00000625037 234 ntBASIC17.12■□□□□ 0.33
HIPK3Q9H422 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.12■□□□□ 0.33
HIPK3Q9H422 AL356737.1-201ENST00000634391 234 ntBASIC17.12■□□□□ 0.33
HIPK3Q9H422 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK3Q9H422 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HIPK3Q9H422 AC022211.2-201ENST00000585075 2527 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms