Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AMBRA1Q9C0C7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.83□□□□□ -0.04
AMBRA1Q9C0C7 AC018892.3-201ENST00000623986 2499 ntBASIC14.83□□□□□ -0.04
AMBRA1Q9C0C7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
AMBRA1Q9C0C7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AMBRA1Q9C0C7 WASH6P-202ENST00000359512 1437 ntBASIC14.83□□□□□ -0.04
AMBRA1Q9C0C7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.83□□□□□ -0.04
AMBRA1Q9C0C7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.83□□□□□ -0.04
AMBRA1Q9C0C7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AMBRA1Q9C0C7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AMBRA1Q9C0C7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 FGD5P1-202ENST00000614866 2498 ntBASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 UPF3AP3-201ENST00000420996 769 ntBASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AMBRA1Q9C0C7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms