Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 BCRP1-201ENST00000444246 691 ntBASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 AC005498.2-205ENST00000593218 784 ntBASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 LINC02228-204ENST00000642115 2962 ntBASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXP3Q9BZS1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 AC024267.1-201ENST00000582320 895 ntBASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 AL096865.1-201ENST00000606796 927 ntBASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 AL691432.1-201ENST00000596308 1422 ntBASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXP3Q9BZS1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms