Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 CNN2P8-201ENST00000421872 913 ntBASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 C2orf27AP3-201ENST00000434123 579 ntBASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 AL355994.2-201ENST00000447882 704 ntBASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 AC025279.2-201ENST00000569730 653 ntBASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 MIR4525-201ENST00000580000 75 ntBASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 RN7SL219P-201ENST00000582872 296 ntBASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 AL354718.3-201ENST00000616414 581 ntBASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 CR382287.1-201ENST00000623954 586 ntBASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 AC079316.1-201ENST00000548397 411 ntBASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 AC145423.3-201ENST00000615987 467 ntBASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 MIR6869-201ENST00000619434 62 ntBASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 AP003680.1-201ENST00000598970 3660 ntBASIC16.12■□□□□ 0.17
SLC46A2Q9BY10 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 AC025181.2-201ENST00000606994 802 ntBASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 BX539320.1-201ENST00000623759 877 ntBASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC46A2Q9BY10 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms