Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.08■□□□□ 0.65
RPAP1Q9BWH6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.08■□□□□ 0.65
RPAP1Q9BWH6 AC015936.2-201ENST00000593177 259 ntBASIC19.08■□□□□ 0.65
RPAP1Q9BWH6 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.08■□□□□ 0.65
RPAP1Q9BWH6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RPAP1Q9BWH6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RPAP1Q9BWH6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPAP1Q9BWH6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPAP1Q9BWH6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPAP1Q9BWH6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 AZGP1P1-201ENST00000411909 902 ntBASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 AC008735.3-201ENST00000596646 500 ntBASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 RPSAP52-203ENST00000622976 1023 ntBASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 PRAL-201ENST00000624952 3286 ntBASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPAP1Q9BWH6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 MIR658-201ENST00000385210 100 ntBASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 PHKG1P2-201ENST00000457537 863 ntBASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 MIR8072-201ENST00000614241 80 ntBASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 REXO1L1P-202ENST00000608646 1974 ntBASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 AL512343.1-201ENST00000605837 169 ntBASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 AL158212.4-201ENST00000624062 1286 ntBASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPAP1Q9BWH6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms