Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.05□□□□□ -0.16
VRK1Q99986 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VRK1Q99986 AL603832.2-201ENST00000566195 2125 ntBASIC14.05□□□□□ -0.16
VRK1Q99986 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VRK1Q99986 AC010491.1-201ENST00000563101 2797 ntBASIC14.05□□□□□ -0.16
VRK1Q99986 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
VRK1Q99986 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 AL122018.1-201ENST00000446607 2310 ntBASIC14.04□□□□□ -0.16
VRK1Q99986 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.04□□□□□ -0.16
VRK1Q99986 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.04□□□□□ -0.16
VRK1Q99986 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.04□□□□□ -0.16
VRK1Q99986 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.04□□□□□ -0.16
VRK1Q99986 AC055876.3-201ENST00000431496 288 ntBASIC14.04□□□□□ -0.16
VRK1Q99986 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 BCRP1-201ENST00000444246 691 ntBASIC14.04□□□□□ -0.16
VRK1Q99986 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.04□□□□□ -0.16
VRK1Q99986 AC069120.2-201ENST00000524091 540 ntBASIC14.04□□□□□ -0.16
VRK1Q99986 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.04□□□□□ -0.16
VRK1Q99986 AC140878.1-201ENST00000565277 250 ntBASIC14.04□□□□□ -0.16
VRK1Q99986 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.04□□□□□ -0.16
VRK1Q99986 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.04□□□□□ -0.16
VRK1Q99986 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.04□□□□□ -0.16
VRK1Q99986 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.04□□□□□ -0.16
VRK1Q99986 AC138649.4-201ENST00000612222 287 ntBASIC14.04□□□□□ -0.16
VRK1Q99986 AL390754.1-201ENST00000619088 582 ntBASIC14.04□□□□□ -0.16
VRK1Q99986 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.04□□□□□ -0.16
VRK1Q99986 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.04□□□□□ -0.16
VRK1Q99986 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VRK1Q99986 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VRK1Q99986 FO538757.1-201ENST00000623083 1397 ntBASIC14.04□□□□□ -0.16
VRK1Q99986 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VRK1Q99986 AC097376.2-205ENST00000610159 5334 ntBASIC14.04□□□□□ -0.16
VRK1Q99986 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VRK1Q99986 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VRK1Q99986 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.04□□□□□ -0.16
VRK1Q99986 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.04□□□□□ -0.16
VRK1Q99986 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.04□□□□□ -0.16
VRK1Q99986 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.04□□□□□ -0.16
VRK1Q99986 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.04□□□□□ -0.16
VRK1Q99986 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.04□□□□□ -0.16
VRK1Q99986 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VRK1Q99986 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.04□□□□□ -0.16
VRK1Q99986 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VRK1Q99986 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
VRK1Q99986 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.03□□□□□ -0.16
VRK1Q99986 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms