Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC6Q99741 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.2■□□□□ 0.02
CDC6Q99741 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.2■□□□□ 0.02
CDC6Q99741 AL008638.5-201ENST00000623814 1298 ntBASIC15.2■□□□□ 0.02
CDC6Q99741 AC132938.4-201ENST00000623835 848 ntBASIC15.2■□□□□ 0.02
CDC6Q99741 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CDC6Q99741 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDC6Q99741 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC6Q99741 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC6Q99741 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDC6Q99741 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC6Q99741 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC6Q99741 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDC6Q99741 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CDC6Q99741 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
CDC6Q99741 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CDC6Q99741 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC6Q99741 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.19■□□□□ 0.02
CDC6Q99741 AC004898.1-201ENST00000451057 766 ntBASIC15.19■□□□□ 0.02
CDC6Q99741 SCARNA20.5-201ENST00000516991 142 ntBASIC15.19■□□□□ 0.02
CDC6Q99741 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.19■□□□□ 0.02
CDC6Q99741 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC6Q99741 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.19■□□□□ 0.02
CDC6Q99741 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.19■□□□□ 0.02
CDC6Q99741 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.19■□□□□ 0.02
CDC6Q99741 AP005019.2-201ENST00000615104 511 ntBASIC15.19■□□□□ 0.02
CDC6Q99741 AC138951.2-201ENST00000623455 1161 ntBASIC15.19■□□□□ 0.02
CDC6Q99741 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.19■□□□□ 0.02
CDC6Q99741 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDC6Q99741 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 AC138028.6-201ENST00000616106 1482 ntBASIC15.19■□□□□ 0.02
CDC6Q99741 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC6Q99741 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.19■□□□□ 0.02
CDC6Q99741 AL139384.1-201ENST00000612143 3047 ntBASIC15.19■□□□□ 0.02
CDC6Q99741 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC6Q99741 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDC6Q99741 AL121723.1-201ENST00000445194 1519 ntBASIC15.18■□□□□ 0.02
CDC6Q99741 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDC6Q99741 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CDC6Q99741 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CDC6Q99741 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.18■□□□□ 0.02
CDC6Q99741 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.18■□□□□ 0.02
CDC6Q99741 AP001582.1-201ENST00000525856 295 ntBASIC15.18■□□□□ 0.02
CDC6Q99741 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.18■□□□□ 0.02
CDC6Q99741 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.18■□□□□ 0.02
CDC6Q99741 AC015910.1-201ENST00000579400 975 ntBASIC15.18■□□□□ 0.02
CDC6Q99741 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.18■□□□□ 0.02
CDC6Q99741 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDC6Q99741 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.18■□□□□ 0.02
CDC6Q99741 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.18■□□□□ 0.02
CDC6Q99741 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.18■□□□□ 0.02
CDC6Q99741 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.18■□□□□ 0.02
CDC6Q99741 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.18■□□□□ 0.02
CDC6Q99741 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.18■□□□□ 0.02
CDC6Q99741 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC6Q99741 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.18■□□□□ 0.02
CDC6Q99741 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.18■□□□□ 0.02
CDC6Q99741 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms