Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.24□□□□□ -0.29
CCL13Q99616 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.24□□□□□ -0.29
CCL13Q99616 TARDBPP1-201ENST00000442013 1203 ntBASIC13.24□□□□□ -0.29
CCL13Q99616 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL13Q99616 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL13Q99616 SDHAP3-202ENST00000515467 728 ntBASIC13.24□□□□□ -0.29
CCL13Q99616 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL13Q99616 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL13Q99616 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL13Q99616 AC025048.3-201ENST00000590609 569 ntBASIC13.24□□□□□ -0.29
CCL13Q99616 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL13Q99616 AC097359.3-201ENST00000603982 1210 ntBASIC13.24□□□□□ -0.29
CCL13Q99616 AC005702.4-201ENST00000618393 416 ntBASIC13.24□□□□□ -0.29
CCL13Q99616 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL13Q99616 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL13Q99616 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CCL13Q99616 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCL13Q99616 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL13Q99616 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL13Q99616 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCL13Q99616 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CCL13Q99616 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCL13Q99616 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 AC022144.1-201ENST00000602255 1580 ntBASIC13.24□□□□□ -0.29
CCL13Q99616 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL13Q99616 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL13Q99616 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL13Q99616 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL13Q99616 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL13Q99616 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
CCL13Q99616 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL13Q99616 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL13Q99616 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL13Q99616 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL13Q99616 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 TSPY26P-202ENST00000565928 3884 ntBASIC13.23□□□□□ -0.29
CCL13Q99616 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.23□□□□□ -0.29
CCL13Q99616 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL13Q99616 AC009477.1-201ENST00000452936 217 ntBASIC13.23□□□□□ -0.29
CCL13Q99616 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL13Q99616 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL13Q99616 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL13Q99616 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.23□□□□□ -0.29
CCL13Q99616 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CCL13Q99616 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL13Q99616 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL13Q99616 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL13Q99616 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL13Q99616 AC009407.1-201ENST00000568958 598 ntBASIC13.23□□□□□ -0.29
CCL13Q99616 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL13Q99616 AC011467.4-201ENST00000594891 528 ntBASIC13.23□□□□□ -0.29
CCL13Q99616 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL13Q99616 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
CCL13Q99616 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL13Q99616 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL13Q99616 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CCL13Q99616 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL13Q99616 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
CCL13Q99616 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL13Q99616 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL13Q99616 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL13Q99616 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL13Q99616 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CCL13Q99616 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms