Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 BAATP1-201ENST00000412284 1225 ntBASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 FAM21FP-201ENST00000426241 1131 ntBASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 AC012441.1-201ENST00000446669 685 ntBASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 AP001063.1-201ENST00000568332 529 ntBASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 MIR6869-201ENST00000619434 62 ntBASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 AL513523.2-202ENST00000427283 2040 ntBASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYNGAP1Q96PV0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 KRT18P43-201ENST00000469825 1281 ntBASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 AC097359.3-201ENST00000603982 1210 ntBASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms