Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 RARRES2P9-201ENST00000565168 469 ntBASIC14.99□□□□□ -0.01
COL21A1Q96P44 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 AP001282.1-201ENST00000531301 1499 ntBASIC14.99□□□□□ -0.01
COL21A1Q96P44 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 AC134407.2-201ENST00000625089 1978 ntBASIC14.98□□□□□ -0.01
COL21A1Q96P44 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 AC026150.2-201ENST00000564693 1156 ntBASIC14.98□□□□□ -0.01
COL21A1Q96P44 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 LINC00628-201ENST00000628516 1289 ntBASIC14.98□□□□□ -0.01
COL21A1Q96P44 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.98□□□□□ -0.01
COL21A1Q96P44 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL21A1Q96P44 SSR4P1-203ENST00000599569 2260 ntBASIC14.97□□□□□ -0.01
COL21A1Q96P44 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 AL161772.1-201ENST00000610494 4412 ntBASIC14.97□□□□□ -0.01
COL21A1Q96P44 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 AC136621.1-201ENST00000624017 2304 ntBASIC14.97□□□□□ -0.01
COL21A1Q96P44 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 HLA-J-203ENST00000494367 1087 ntBASIC14.97□□□□□ -0.01
COL21A1Q96P44 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 AP001059.3-201ENST00000619053 235 ntBASIC14.97□□□□□ -0.01
COL21A1Q96P44 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 AC020658.6-201ENST00000623564 1870 ntBASIC14.97□□□□□ -0.01
COL21A1Q96P44 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms