Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 AP006294.1-201ENST00000415407 339 ntBASIC14.33□□□□□ -0.12
LRRC46Q96FV0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 AL009178.2-201ENST00000597278 2719 ntBASIC14.33□□□□□ -0.12
LRRC46Q96FV0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRC46Q96FV0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 AL391256.1-201ENST00000443260 1855 ntBASIC14.32□□□□□ -0.12
LRRC46Q96FV0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 AL139010.1-201ENST00000454878 894 ntBASIC14.32□□□□□ -0.12
LRRC46Q96FV0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.32□□□□□ -0.12
LRRC46Q96FV0 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.32□□□□□ -0.12
LRRC46Q96FV0 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.32□□□□□ -0.12
LRRC46Q96FV0 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.32□□□□□ -0.12
LRRC46Q96FV0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LRRC46Q96FV0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC46Q96FV0 FAM45BP-202ENST00000592932 1624 ntBASIC14.31□□□□□ -0.12
LRRC46Q96FV0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms