Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 AC098859.1-201ENST00000502915 1238 ntBASIC13.81□□□□□ -0.2
CPNE2Q96FN4 AC105233.2-201ENST00000523697 349 ntBASIC13.81□□□□□ -0.2
CPNE2Q96FN4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 AF228730.5-201ENST00000530288 346 ntBASIC13.81□□□□□ -0.2
CPNE2Q96FN4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 AL049840.3-201ENST00000602669 611 ntBASIC13.81□□□□□ -0.2
CPNE2Q96FN4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 KRT19P2-202ENST00000557173 1012 ntBASIC13.8□□□□□ -0.2
CPNE2Q96FN4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 AC064836.3-201ENST00000607928 673 ntBASIC13.8□□□□□ -0.2
CPNE2Q96FN4 AC004877.2-201ENST00000623941 599 ntBASIC13.8□□□□□ -0.2
CPNE2Q96FN4 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 AC013268.4-201ENST00000637413 2228 ntBASIC13.8□□□□□ -0.2
CPNE2Q96FN4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE2Q96FN4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms