Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AC022748.3-201ENST00000621828 275 ntBASIC18.19■□□□□ 0.5
CDCA5Q96FF9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 DPM3-202ENST00000368399 517 ntBASIC18.18■□□□□ 0.5
CDCA5Q96FF9 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 AC011742.3-201ENST00000439053 820 ntBASIC18.18■□□□□ 0.5
CDCA5Q96FF9 AC100850.1-201ENST00000506768 649 ntBASIC18.18■□□□□ 0.5
CDCA5Q96FF9 AL391280.1-201ENST00000506969 1062 ntBASIC18.18■□□□□ 0.5
CDCA5Q96FF9 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 MIR4313-201ENST00000580760 101 ntBASIC18.18■□□□□ 0.5
CDCA5Q96FF9 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 AF254983.2-201ENST00000612331 135 ntBASIC18.18■□□□□ 0.5
CDCA5Q96FF9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
CDCA5Q96FF9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 CHMP1AP1-201ENST00000445563 662 ntBASIC18.17■□□□□ 0.5
CDCA5Q96FF9 AL596276.2-201ENST00000447525 331 ntBASIC18.17■□□□□ 0.5
CDCA5Q96FF9 AC012618.1-201ENST00000461223 412 ntBASIC18.17■□□□□ 0.5
CDCA5Q96FF9 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 IQSEC3P1-201ENST00000538799 536 ntBASIC18.17■□□□□ 0.5
CDCA5Q96FF9 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 RN7SL555P-201ENST00000584742 339 ntBASIC18.17■□□□□ 0.5
CDCA5Q96FF9 AC026740.1-201ENST00000607068 791 ntBASIC18.17■□□□□ 0.5
CDCA5Q96FF9 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 AC100757.4-201ENST00000626934 759 ntBASIC18.17■□□□□ 0.5
CDCA5Q96FF9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 KRT8P29-201ENST00000420409 1371 ntBASIC18.17■□□□□ 0.5
CDCA5Q96FF9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA5Q96FF9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 POM121L8P-201ENST00000417732 1281 ntBASIC18.16■□□□□ 0.5
CDCA5Q96FF9 POM121L9P-203ENST00000441984 1285 ntBASIC18.16■□□□□ 0.5
CDCA5Q96FF9 AC021723.1-201ENST00000486306 515 ntBASIC18.16■□□□□ 0.5
CDCA5Q96FF9 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 MIR3147-201ENST00000577811 66 ntBASIC18.16■□□□□ 0.5
CDCA5Q96FF9 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms