Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 AL607033.1-201ENST00000623900 1599 ntBASIC16.72■□□□□ 0.27
TRIM11Q96F44 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 KRT8P12-202ENST00000472924 1397 ntBASIC16.71■□□□□ 0.27
TRIM11Q96F44 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM11Q96F44 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.71■□□□□ 0.27
TRIM11Q96F44 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRIM11Q96F44 AC009090.5-201ENST00000624886 2285 ntBASIC16.71■□□□□ 0.27
TRIM11Q96F44 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM11Q96F44 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM11Q96F44 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
TRIM11Q96F44 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 KRT8P44-201ENST00000441609 1350 ntBASIC16.7■□□□□ 0.26
TRIM11Q96F44 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 AC211486.1-202ENST00000416371 468 ntBASIC16.7■□□□□ 0.26
TRIM11Q96F44 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 AC211476.1-201ENST00000503899 468 ntBASIC16.7■□□□□ 0.26
TRIM11Q96F44 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 AL133215.2-201ENST00000609242 977 ntBASIC16.7■□□□□ 0.26
TRIM11Q96F44 MIR6080-201ENST00000617359 66 ntBASIC16.7■□□□□ 0.26
TRIM11Q96F44 AP001059.3-201ENST00000619053 235 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms