Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 AC098831.1-202ENST00000438821 336 ntBASIC14.07□□□□□ -0.16
RFT1Q96AA3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RFT1Q96AA3 MIR7706-201ENST00000613747 67 ntBASIC14.07□□□□□ -0.16
RFT1Q96AA3 AL031008.1-201ENST00000619963 541 ntBASIC14.07□□□□□ -0.16
RFT1Q96AA3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
RFT1Q96AA3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 ST20-AS1-201ENST00000560255 4223 ntBASIC14.07□□□□□ -0.16
RFT1Q96AA3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.07□□□□□ -0.16
RFT1Q96AA3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.07□□□□□ -0.16
RFT1Q96AA3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.07□□□□□ -0.16
RFT1Q96AA3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
RFT1Q96AA3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RFT1Q96AA3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RFT1Q96AA3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 AC005912.2-201ENST00000619492 2400 ntBASIC14.06□□□□□ -0.16
RFT1Q96AA3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 AC008677.1-201ENST00000519230 1561 ntBASIC14.06□□□□□ -0.16
RFT1Q96AA3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 RN7SL510P-201ENST00000581311 263 ntBASIC14.06□□□□□ -0.16
RFT1Q96AA3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFT1Q96AA3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.06□□□□□ -0.16
RFT1Q96AA3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 AC004870.1-201ENST00000315132 882 ntBASIC14.05□□□□□ -0.16
RFT1Q96AA3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms