Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 SPDYE7P-202ENST00000420373 878 ntBASIC13.87□□□□□ -0.19
SPTSSAQ969W0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 AC093520.2-201ENST00000561830 333 ntBASIC13.87□□□□□ -0.19
SPTSSAQ969W0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 MIR4313-201ENST00000580760 101 ntBASIC13.87□□□□□ -0.19
SPTSSAQ969W0 AC009093.7-201ENST00000623853 1223 ntBASIC13.87□□□□□ -0.19
SPTSSAQ969W0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 AC092127.1-201ENST00000567093 3455 ntBASIC13.87□□□□□ -0.19
SPTSSAQ969W0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.87□□□□□ -0.19
SPTSSAQ969W0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 AC254562.1-201ENST00000417586 456 ntBASIC13.86□□□□□ -0.19
SPTSSAQ969W0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 AC026150.2-201ENST00000564693 1156 ntBASIC13.86□□□□□ -0.19
SPTSSAQ969W0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 AC007967.4-201ENST00000614700 386 ntBASIC13.86□□□□□ -0.19
SPTSSAQ969W0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.86□□□□□ -0.19
SPTSSAQ969W0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 AC073347.1-201ENST00000421633 2643 ntBASIC13.86□□□□□ -0.19
SPTSSAQ969W0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 AC105250.1-201ENST00000509378 2057 ntBASIC13.86□□□□□ -0.19
SPTSSAQ969W0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSAQ969W0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSAQ969W0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms