Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 AC114501.2-201ENST00000439631 535 ntBASIC16.69■□□□□ 0.26
ATP2A3Q93084 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 GNAQP1-201ENST00000444815 1067 ntBASIC16.69■□□□□ 0.26
ATP2A3Q93084 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 AL365330.1-201ENST00000607459 531 ntBASIC16.69■□□□□ 0.26
ATP2A3Q93084 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 HYMAI-201ENST00000635591 3347 ntBASIC16.69■□□□□ 0.26
ATP2A3Q93084 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 AC138969.3-201ENST00000546612 1459 ntBASIC16.68■□□□□ 0.26
ATP2A3Q93084 AC138932.2-201ENST00000548268 1459 ntBASIC16.68■□□□□ 0.26
ATP2A3Q93084 AC126755.4-201ENST00000549796 1459 ntBASIC16.68■□□□□ 0.26
ATP2A3Q93084 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 U82695.1-201ENST00000635752 1889 ntBASIC16.68■□□□□ 0.26
ATP2A3Q93084 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 SPDYE19P-201ENST00000338590 713 ntBASIC16.68■□□□□ 0.26
ATP2A3Q93084 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A3Q93084 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A3Q93084 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 AC005622.1-201ENST00000636801 1703 ntBASIC16.67■□□□□ 0.26
ATP2A3Q93084 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 AC006449.6-201ENST00000612330 2296 ntBASIC16.67■□□□□ 0.26
ATP2A3Q93084 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 OR8S1-201ENST00000310194 1080 ntBASIC16.67■□□□□ 0.26
ATP2A3Q93084 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms