Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 CYP2T1P-202ENST00000641596 2535 ntBASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 DUX4L45-201ENST00000566406 1057 ntBASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 LINC01115-203ENST00000606068 577 ntBASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 AL391005.1-201ENST00000623953 2435 ntBASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2AF1L4Q8WU68 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 Z97205.2-201ENST00000564697 1639 ntBASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2AF1L4Q8WU68 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
U2AF1L4Q8WU68 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
U2AF1L4Q8WU68 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
U2AF1L4Q8WU68 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.02■□□□□ 0.47
U2AF1L4Q8WU68 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
U2AF1L4Q8WU68 AC005052.1-201ENST00000625181 2492 ntBASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 AC016694.1-201ENST00000434179 700 ntBASIC18.01■□□□□ 0.47
U2AF1L4Q8WU68 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms