Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 AC015910.1-201ENST00000579400 975 ntBASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 AC093813.1-201ENST00000605066 256 ntBASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 AL022328.3-201ENST00000607943 679 ntBASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 AL021578.1-201ENST00000613646 709 ntBASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMFBP1Q8TBY8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 ME2P1-201ENST00000426028 1970 ntBASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 AC007969.1-201ENST00000433675 447 ntBASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 AP001258.2-201ENST00000529891 490 ntBASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 AC145423.3-201ENST00000615987 467 ntBASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 PPA1-206ENST00000625364 644 ntTSL 5 BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PMFBP1Q8TBY8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 IGHJ2P-201ENST00000454480 60 ntBASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 AC138951.2-201ENST00000623455 1161 ntBASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMFBP1Q8TBY8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 AL590640.2-201ENST00000457038 527 ntBASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PMFBP1Q8TBY8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms