Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 AC114501.2-201ENST00000439631 535 ntBASIC16.7■□□□□ 0.26
UBA3Q8TBC4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 TSPY16P-201ENST00000449843 468 ntBASIC16.7■□□□□ 0.26
UBA3Q8TBC4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 AC004790.1-201ENST00000612686 536 ntBASIC16.7■□□□□ 0.26
UBA3Q8TBC4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 AC127383.1-201ENST00000444697 1800 ntBASIC16.69■□□□□ 0.26
UBA3Q8TBC4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 RPL13P2-201ENST00000440687 659 ntBASIC16.69■□□□□ 0.26
UBA3Q8TBC4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 AC104794.3-201ENST00000566840 1248 ntBASIC16.69■□□□□ 0.26
UBA3Q8TBC4 AJ011932.1-201ENST00000621707 465 ntBASIC16.69■□□□□ 0.26
UBA3Q8TBC4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBA3Q8TBC4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 BTBD7P1-201ENST00000447253 1453 ntBASIC16.68■□□□□ 0.26
UBA3Q8TBC4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 MIR661-201ENST00000384842 89 ntBASIC16.68■□□□□ 0.26
UBA3Q8TBC4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
UBA3Q8TBC4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms