Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 AC093813.1-201ENST00000605066 256 ntBASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 AC046158.3-201ENST00000624947 2558 ntBASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 KRT18P64-201ENST00000434946 1219 ntBASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 AC022137.2-201ENST00000503482 481 ntBASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 KRT90P-201ENST00000549264 1064 ntBASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 AC023310.1-201ENST00000554836 735 ntBASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 AL450472.2-201ENST00000603663 1156 ntBASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 AC005252.2-201ENST00000624630 1141 ntBASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
SYNPOQ8N3V7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 KRT18P43-201ENST00000469825 1281 ntBASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 RN7SL560P-201ENST00000577943 264 ntBASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms