Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 BX640515.1-201ENST00000617215 977 ntBASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 AC091812.2-201ENST00000619081 385 ntBASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 OR2I1P-210ENST00000642037 4691 ntBASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 AL355306.1-201ENST00000415580 579 ntBASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 AL671277.1-201ENST00000429656 993 ntBASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 AC243562.2-201ENST00000561247 970 ntBASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 AC027307.2-201ENST00000591252 911 ntBASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 AC073389.1-201ENST00000595595 795 ntBASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 FAM197Y3-203ENST00000618346 717 ntBASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC50Q8IVM0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 AKAP8P1-201ENST00000434743 1349 ntBASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 TMBIM7P-203ENST00000641617 1718 ntBASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 SNX18-202ENST00000343017 3140 ntBASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 MIR940-201ENST00000401276 94 ntBASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 TFAMP1-201ENST00000412727 736 ntBASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 AC023274.1-201ENST00000418278 595 ntBASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 FAM58CP-201ENST00000435741 640 ntBASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 RNA5SP410-201ENST00000516285 106 ntBASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms