Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 AC079776.2-201ENST00000641154 1609 ntBASIC16.02■□□□□ 0.16
PACS2Q86VP3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PACS2Q86VP3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PACS2Q86VP3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PACS2Q86VP3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PACS2Q86VP3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PACS2Q86VP3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PACS2Q86VP3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PACS2Q86VP3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PACS2Q86VP3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 RPS2P28-201ENST00000314255 741 ntBASIC16.02■□□□□ 0.16
PACS2Q86VP3 AC003669.1-201ENST00000334569 611 ntBASIC16.02■□□□□ 0.16
PACS2Q86VP3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PACS2Q86VP3 KLF4P1-201ENST00000412782 1185 ntBASIC16.02■□□□□ 0.16
PACS2Q86VP3 KRT18P67-201ENST00000432816 1264 ntBASIC16.02■□□□□ 0.16
PACS2Q86VP3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 RNPS1P1-201ENST00000507437 918 ntBASIC16.02■□□□□ 0.16
PACS2Q86VP3 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 AC019129.2-201ENST00000609837 1235 ntBASIC16.02■□□□□ 0.16
PACS2Q86VP3 AL773604.1-201ENST00000617417 272 ntBASIC16.02■□□□□ 0.16
PACS2Q86VP3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
PACS2Q86VP3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PACS2Q86VP3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PACS2Q86VP3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.02■□□□□ 0.15
PACS2Q86VP3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.02■□□□□ 0.15
PACS2Q86VP3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PACS2Q86VP3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
PACS2Q86VP3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.02■□□□□ 0.15
PACS2Q86VP3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PACS2Q86VP3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PACS2Q86VP3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.02■□□□□ 0.15
PACS2Q86VP3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.02■□□□□ 0.15
PACS2Q86VP3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PACS2Q86VP3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.02■□□□□ 0.15
PACS2Q86VP3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PACS2Q86VP3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PACS2Q86VP3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PACS2Q86VP3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PACS2Q86VP3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.02■□□□□ 0.15
PACS2Q86VP3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PACS2Q86VP3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 AL020989.1-201ENST00000422979 469 ntBASIC16.01■□□□□ 0.15
PACS2Q86VP3 FDX1P1-201ENST00000449115 551 ntBASIC16.01■□□□□ 0.15
PACS2Q86VP3 AC009078.2-202ENST00000463353 338 ntBASIC16.01■□□□□ 0.15
PACS2Q86VP3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 NKAPP1-205ENST00000585790 367 ntBASIC16.01■□□□□ 0.15
PACS2Q86VP3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 TP73-AS1-207ENST00000624167 988 ntBASIC16.01■□□□□ 0.15
PACS2Q86VP3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 AC105206.1-202ENST00000314927 2368 ntBASIC16.01■□□□□ 0.15
PACS2Q86VP3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.01■□□□□ 0.15
PACS2Q86VP3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PACS2Q86VP3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms