Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 MBLAC2-202ENST00000514906 1936 ntBASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 ACTG1P4-201ENST00000425123 1122 ntBASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 AC117947.1-201ENST00000427448 529 ntBASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 GPR32P1-201ENST00000601788 811 ntBASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 AC020765.3-201ENST00000613051 740 ntBASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 AC132938.5-201ENST00000624980 1813 ntBASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 SLC22A20-204ENST00000530038 1673 ntBASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP4Q6PIL6 AL353692.3-201ENST00000407031 1396 ntBASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP4Q6PIL6 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms