Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 AC023157.3-201ENST00000619086 2088 ntBASIC16.59■□□□□ 0.25
RNF43Q68DV7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 AC010336.2-201ENST00000564226 506 ntBASIC16.59■□□□□ 0.25
RNF43Q68DV7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF43Q68DV7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF43Q68DV7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.58■□□□□ 0.25
RNF43Q68DV7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.58■□□□□ 0.25
RNF43Q68DV7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF43Q68DV7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF43Q68DV7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF43Q68DV7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF43Q68DV7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RNF43Q68DV7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.58■□□□□ 0.25
RNF43Q68DV7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF43Q68DV7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF43Q68DV7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.58■□□□□ 0.25
RNF43Q68DV7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.58■□□□□ 0.24
RNF43Q68DV7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.58■□□□□ 0.24
RNF43Q68DV7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 HILS1-202ENST00000545329 423 ntBASIC16.58■□□□□ 0.24
RNF43Q68DV7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 AL512361.1-201ENST00000554200 418 ntBASIC16.58■□□□□ 0.24
RNF43Q68DV7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms