Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 KRT8P44-201ENST00000441609 1350 ntBASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 RN7SL618P-201ENST00000477850 296 ntBASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 LINC01115-203ENST00000606068 577 ntBASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 AL158211.3-201ENST00000607385 239 ntBASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 AL844908.2-201ENST00000609461 460 ntBASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CREB3L3Q68CJ9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 RPL13P2-201ENST00000440687 659 ntBASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 SLED1-202ENST00000512051 380 ntBASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 AL109936.8-201ENST00000641772 604 ntBASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 AC087499.5-201ENST00000452760 1342 ntBASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.73■□□□□ 0.59
CREB3L3Q68CJ9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.72■□□□□ 0.59
CREB3L3Q68CJ9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CREB3L3Q68CJ9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CREB3L3Q68CJ9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CREB3L3Q68CJ9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CREB3L3Q68CJ9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CREB3L3Q68CJ9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CREB3L3Q68CJ9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CREB3L3Q68CJ9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CREB3L3Q68CJ9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CREB3L3Q68CJ9 MIR943-201ENST00000401286 94 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms