Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 MTHFR-210ENST00000641407 2387 ntBASIC14.94□□□□□ -0.02
LPCAT4Q643R3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 ABCD1P5-201ENST00000445663 754 ntBASIC14.94□□□□□ -0.02
LPCAT4Q643R3 AC245100.5-201ENST00000452108 331 ntBASIC14.94□□□□□ -0.02
LPCAT4Q643R3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.94□□□□□ -0.02
LPCAT4Q643R3 AC012306.2-201ENST00000609350 630 ntBASIC14.94□□□□□ -0.02
LPCAT4Q643R3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 AF228730.7-201ENST00000641842 219 ntBASIC14.94□□□□□ -0.02
LPCAT4Q643R3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 AC099521.3-201ENST00000624251 2938 ntBASIC14.93□□□□□ -0.02
LPCAT4Q643R3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 PRYP5-201ENST00000451909 266 ntBASIC14.93□□□□□ -0.02
LPCAT4Q643R3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.93□□□□□ -0.02
LPCAT4Q643R3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 AP001282.1-201ENST00000531301 1499 ntBASIC14.93□□□□□ -0.02
LPCAT4Q643R3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LPCAT4Q643R3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 PTCHD3P3-201ENST00000403073 906 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms