Protein–RNA interactions for Protein: Q5VTT2

C9orf135, Protein C9orf135, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135Q5VTT2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 MRPS18AP1-201ENST00000414458 589 ntBASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 FAM8A3P-201ENST00000427218 844 ntBASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 HIST3H2BA-201ENST00000436555 524 ntBASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 AC092364.2-202ENST00000597012 1073 ntBASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 AC008738.7-201ENST00000609744 511 ntBASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 AJ011932.1-201ENST00000621707 465 ntBASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 AC112504.1-201ENST00000623415 1841 ntBASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf135Q5VTT2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
C9orf135Q5VTT2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 AC135586.1-201ENST00000539323 574 ntBASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 AC009407.1-201ENST00000568958 598 ntBASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 AL450472.2-201ENST00000603663 1156 ntBASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf135Q5VTT2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf135Q5VTT2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
C9orf135Q5VTT2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.01□□□□□ -0.17
C9orf135Q5VTT2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf135Q5VTT2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf135Q5VTT2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
C9orf135Q5VTT2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf135Q5VTT2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
C9orf135Q5VTT2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.01□□□□□ -0.17
C9orf135Q5VTT2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.01□□□□□ -0.17
C9orf135Q5VTT2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms