Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 FLJ16779-201ENST00000612722 7638 ntBASIC15.31■□□□□ 0.04
RNF220Q5VTB9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 AL031284.1-201ENST00000419297 478 ntBASIC15.3■□□□□ 0.04
RNF220Q5VTB9 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 FAM185BP-201ENST00000443595 716 ntBASIC15.3■□□□□ 0.04
RNF220Q5VTB9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.3■□□□□ 0.04
RNF220Q5VTB9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 AL160237.2-201ENST00000556165 472 ntBASIC15.3■□□□□ 0.04
RNF220Q5VTB9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 AC020765.3-201ENST00000613051 740 ntBASIC15.3■□□□□ 0.04
RNF220Q5VTB9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 Z82170.1-201ENST00000625081 3192 ntBASIC15.3■□□□□ 0.04
RNF220Q5VTB9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF220Q5VTB9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 AC027612.1-201ENST00000445234 2395 ntBASIC15.29■□□□□ 0.04
RNF220Q5VTB9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 AC092910.1-201ENST00000482027 1129 ntBASIC15.29■□□□□ 0.04
RNF220Q5VTB9 AC108751.1-201ENST00000490852 363 ntBASIC15.29■□□□□ 0.04
RNF220Q5VTB9 CXCL1P1-201ENST00000502804 216 ntBASIC15.29■□□□□ 0.04
RNF220Q5VTB9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 MIR3909-201ENST00000579518 119 ntBASIC15.29■□□□□ 0.04
RNF220Q5VTB9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 MIR4515-201ENST00000584082 81 ntBASIC15.29■□□□□ 0.04
RNF220Q5VTB9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms