Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 RN7SL837P-201ENST00000463010 287 ntBASIC21.63■■□□□ 1.05
CDCA8Q53HL2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 RPL5P21-201ENST00000404620 815 ntBASIC21.62■■□□□ 1.05
CDCA8Q53HL2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 AC007389.4-201ENST00000454674 793 ntBASIC21.62■■□□□ 1.05
CDCA8Q53HL2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 IGHV3-72-202ENST00000621503 303 ntBASIC21.62■■□□□ 1.05
CDCA8Q53HL2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA8Q53HL2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 AC084364.1-201ENST00000551967 1556 ntBASIC21.61■■□□□ 1.05
CDCA8Q53HL2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 GIMAP3P-201ENST00000495150 836 ntBASIC21.61■■□□□ 1.05
CDCA8Q53HL2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 CU634019.7-201ENST00000624153 1185 ntBASIC21.61■■□□□ 1.05
CDCA8Q53HL2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 FP236241.2-201ENST00000624906 1185 ntBASIC21.61■■□□□ 1.05
CDCA8Q53HL2 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.61■■□□□ 1.05
CDCA8Q53HL2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA8Q53HL2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA8Q53HL2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms