Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
PCGF3Q3KNV8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.08□□□□□ -0.15
PCGF3Q3KNV8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PCGF3Q3KNV8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
PCGF3Q3KNV8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
PCGF3Q3KNV8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.08□□□□□ -0.15
PCGF3Q3KNV8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 TSEN15P1-201ENST00000423257 515 ntBASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 KRT18P32-201ENST00000424695 1287 ntBASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 SPCS2P4-201ENST00000436160 681 ntBASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 AC009093.7-201ENST00000623853 1223 ntBASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.08□□□□□ -0.16
PCGF3Q3KNV8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 GPAA1P2-202ENST00000606848 1787 ntBASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 PMS2P2-201ENST00000425039 1128 ntBASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 METTL21AP1-201ENST00000438852 635 ntBASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 AC025678.2-201ENST00000562061 970 ntBASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms