Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.75□□□□□ -0.05
RFX4Q33E94 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.75□□□□□ -0.05
RFX4Q33E94 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
RFX4Q33E94 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RFX4Q33E94 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 AC148477.4-201ENST00000613430 1793 ntBASIC14.75□□□□□ -0.05
RFX4Q33E94 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RFX4Q33E94 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RFX4Q33E94 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RFX4Q33E94 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RFX4Q33E94 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RFX4Q33E94 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 AC005912.2-201ENST00000619492 2400 ntBASIC14.74□□□□□ -0.05
RFX4Q33E94 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.74□□□□□ -0.05
RFX4Q33E94 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.74□□□□□ -0.05
RFX4Q33E94 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
RFX4Q33E94 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.74□□□□□ -0.05
RFX4Q33E94 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.74□□□□□ -0.05
RFX4Q33E94 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.74□□□□□ -0.05
RFX4Q33E94 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.74□□□□□ -0.05
RFX4Q33E94 AC108751.1-201ENST00000490852 363 ntBASIC14.74□□□□□ -0.05
RFX4Q33E94 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
RFX4Q33E94 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.74□□□□□ -0.05
RFX4Q33E94 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RFX4Q33E94 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
RFX4Q33E94 AJ011931.1-201ENST00000618749 2492 ntBASIC14.74□□□□□ -0.05
RFX4Q33E94 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFX4Q33E94 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.74□□□□□ -0.05
RFX4Q33E94 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.74□□□□□ -0.05
RFX4Q33E94 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.74□□□□□ -0.05
RFX4Q33E94 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.74□□□□□ -0.05
RFX4Q33E94 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RFX4Q33E94 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
RFX4Q33E94 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFX4Q33E94 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RFX4Q33E94 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.73□□□□□ -0.05
RFX4Q33E94 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFX4Q33E94 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RFX4Q33E94 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFX4Q33E94 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RFX4Q33E94 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFX4Q33E94 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
RFX4Q33E94 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFX4Q33E94 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFX4Q33E94 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RFX4Q33E94 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFX4Q33E94 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 AL645939.2-201ENST00000427340 991 ntBASIC14.73□□□□□ -0.05
RFX4Q33E94 VN2R19P-201ENST00000442399 1052 ntBASIC14.73□□□□□ -0.05
RFX4Q33E94 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFX4Q33E94 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFX4Q33E94 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.73□□□□□ -0.05
RFX4Q33E94 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.73□□□□□ -0.05
RFX4Q33E94 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFX4Q33E94 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFX4Q33E94 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.73□□□□□ -0.05
RFX4Q33E94 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFX4Q33E94 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RFX4Q33E94 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RFX4Q33E94 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms