Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 TNRC18P3-201ENST00000441896 2691 ntBASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 AHCYP2-201ENST00000430630 1300 ntBASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 AL591846.1-201ENST00000451736 433 ntBASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 BX539320.1-201ENST00000623759 877 ntBASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM71Q2Q1W2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 PRORSD1P-202ENST00000563365 2154 ntBASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 AL513477.1-201ENST00000602865 2407 ntBASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 Z93015.1-201ENST00000451718 390 ntBASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 RNA5SP486-201ENST00000515961 83 ntBASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 MIR4741-201ENST00000579822 90 ntBASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM71Q2Q1W2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 MIR1202-201ENST00000408529 83 ntBASIC17.04■□□□□ 0.32
TRIM71Q2Q1W2 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms