Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 MIR4259-201ENST00000584466 101 ntBASIC18.92■□□□□ 0.62
RFX7Q2KHR2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.92■□□□□ 0.62
RFX7Q2KHR2 AL033527.5-201ENST00000641382 801 ntBASIC18.92■□□□□ 0.62
RFX7Q2KHR2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.91■□□□□ 0.62
RFX7Q2KHR2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.91■□□□□ 0.62
RFX7Q2KHR2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 PPT1-215ENST00000641471 2368 ntBASIC18.91■□□□□ 0.62
RFX7Q2KHR2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX7Q2KHR2 AC112693.3-201ENST00000624819 1983 ntBASIC18.9■□□□□ 0.62
RFX7Q2KHR2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 MIR658-201ENST00000385210 100 ntBASIC18.9■□□□□ 0.62
RFX7Q2KHR2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFX7Q2KHR2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.62
RFX7Q2KHR2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.89■□□□□ 0.62
RFX7Q2KHR2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RFX7Q2KHR2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RFX7Q2KHR2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RFX7Q2KHR2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.89■□□□□ 0.62
RFX7Q2KHR2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RFX7Q2KHR2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.89■□□□□ 0.62
RFX7Q2KHR2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 PRAL-201ENST00000624952 3286 ntBASIC18.89■□□□□ 0.61
RFX7Q2KHR2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 KRT8P44-201ENST00000441609 1350 ntBASIC18.89■□□□□ 0.61
RFX7Q2KHR2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms