Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PDE4BQ07343 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.64■□□□□ 0.57
PDE4BQ07343 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE4BQ07343 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE4BQ07343 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.64■□□□□ 0.57
PDE4BQ07343 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE4BQ07343 LINC00554-201ENST00000564841 3011 ntBASIC18.63■□□□□ 0.57
PDE4BQ07343 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE4BQ07343 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PDE4BQ07343 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PDE4BQ07343 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE4BQ07343 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 MYCLP2-201ENST00000449268 967 ntBASIC18.63■□□□□ 0.57
PDE4BQ07343 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE4BQ07343 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE4BQ07343 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PDE4BQ07343 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PDE4BQ07343 AC005225.4-201ENST00000557330 545 ntBASIC18.63■□□□□ 0.57
PDE4BQ07343 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.63■□□□□ 0.57
PDE4BQ07343 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
PDE4BQ07343 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE4BQ07343 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE4BQ07343 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PDE4BQ07343 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE4BQ07343 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PDE4BQ07343 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE4BQ07343 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PDE4BQ07343 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE4BQ07343 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PDE4BQ07343 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE4BQ07343 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE4BQ07343 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE4BQ07343 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE4BQ07343 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PDE4BQ07343 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
PDE4BQ07343 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.62■□□□□ 0.57
PDE4BQ07343 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PDE4BQ07343 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
PDE4BQ07343 RN7SL692P-201ENST00000464677 288 ntBASIC18.62■□□□□ 0.57
PDE4BQ07343 RN7SL399P-201ENST00000471648 279 ntBASIC18.62■□□□□ 0.57
PDE4BQ07343 AC104596.2-201ENST00000512793 793 ntBASIC18.62■□□□□ 0.57
PDE4BQ07343 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.62■□□□□ 0.57
PDE4BQ07343 AL596325.1-201ENST00000563991 1082 ntBASIC18.62■□□□□ 0.57
PDE4BQ07343 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.62■□□□□ 0.57
PDE4BQ07343 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE4BQ07343 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.62■□□□□ 0.57
PDE4BQ07343 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE4BQ07343 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PDE4BQ07343 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PDE4BQ07343 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PDE4BQ07343 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
PDE4BQ07343 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE4BQ07343 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
PDE4BQ07343 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
PDE4BQ07343 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PDE4BQ07343 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE4BQ07343 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE4BQ07343 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE4BQ07343 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PDE4BQ07343 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE4BQ07343 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.61■□□□□ 0.57
PDE4BQ07343 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE4BQ07343 AC105917.1-201ENST00000506637 2539 ntBASIC18.61■□□□□ 0.57
PDE4BQ07343 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE4BQ07343 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE4BQ07343 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE4BQ07343 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PDE4BQ07343 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
PDE4BQ07343 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE4BQ07343 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE4BQ07343 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.61■□□□□ 0.57
PDE4BQ07343 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PDE4BQ07343 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms