Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 FAM58DP-201ENST00000428076 619 ntBASIC15.25■□□□□ 0.03
HMGCS1Q01581 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 MIR4469-201ENST00000583919 79 ntBASIC15.25■□□□□ 0.03
HMGCS1Q01581 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 AC055717.3-201ENST00000622967 595 ntBASIC15.25■□□□□ 0.03
HMGCS1Q01581 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 EEF1DP4-201ENST00000446006 880 ntBASIC15.24■□□□□ 0.03
HMGCS1Q01581 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 YBX1P5-201ENST00000509441 847 ntBASIC15.24■□□□□ 0.03
HMGCS1Q01581 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.24■□□□□ 0.03
HMGCS1Q01581 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCS1Q01581 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms