Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SKOR1P84550 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.65■□□□□ 0.26
SKOR1P84550 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SKOR1P84550 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SKOR1P84550 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SKOR1P84550 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.65■□□□□ 0.26
SKOR1P84550 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SKOR1P84550 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
SKOR1P84550 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.64■□□□□ 0.25
SKOR1P84550 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SKOR1P84550 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SKOR1P84550 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.64■□□□□ 0.25
SKOR1P84550 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.64■□□□□ 0.25
SKOR1P84550 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.64■□□□□ 0.25
SKOR1P84550 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.64■□□□□ 0.25
SKOR1P84550 ACTG1P14-201ENST00000446382 1122 ntBASIC16.64■□□□□ 0.25
SKOR1P84550 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.64■□□□□ 0.25
SKOR1P84550 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.64■□□□□ 0.25
SKOR1P84550 AL138918.1-201ENST00000568306 659 ntBASIC16.64■□□□□ 0.25
SKOR1P84550 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.64■□□□□ 0.25
SKOR1P84550 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SKOR1P84550 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SKOR1P84550 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.64■□□□□ 0.25
SKOR1P84550 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.64■□□□□ 0.25
SKOR1P84550 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.64■□□□□ 0.25
SKOR1P84550 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SKOR1P84550 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.64■□□□□ 0.25
SKOR1P84550 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.64■□□□□ 0.25
SKOR1P84550 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKOR1P84550 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SKOR1P84550 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SKOR1P84550 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SKOR1P84550 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
SKOR1P84550 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.63■□□□□ 0.25
SKOR1P84550 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.63■□□□□ 0.25
SKOR1P84550 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 MIR770-201ENST00000390219 98 ntBASIC16.63■□□□□ 0.25
SKOR1P84550 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.63■□□□□ 0.25
SKOR1P84550 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.63■□□□□ 0.25
SKOR1P84550 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.63■□□□□ 0.25
SKOR1P84550 KRT8P48-201ENST00000515599 1220 ntBASIC16.63■□□□□ 0.25
SKOR1P84550 FAM86C2P-203ENST00000528684 1004 ntBASIC16.63■□□□□ 0.25
SKOR1P84550 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
SKOR1P84550 AC243562.1-201ENST00000560672 389 ntBASIC16.63■□□□□ 0.25
SKOR1P84550 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.63■□□□□ 0.25
SKOR1P84550 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.63■□□□□ 0.25
SKOR1P84550 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.63■□□□□ 0.25
SKOR1P84550 AC027612.4-201ENST00000605371 583 ntBASIC16.63■□□□□ 0.25
SKOR1P84550 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.63■□□□□ 0.25
SKOR1P84550 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.63■□□□□ 0.25
SKOR1P84550 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.63■□□□□ 0.25
SKOR1P84550 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SKOR1P84550 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SKOR1P84550 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.63■□□□□ 0.25
SKOR1P84550 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.63■□□□□ 0.25
SKOR1P84550 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.63■□□□□ 0.25
SKOR1P84550 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms