Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE1AP54750 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.24■□□□□ 0.67
PDE1AP54750 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PDE1AP54750 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE1AP54750 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE1AP54750 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
PDE1AP54750 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE1AP54750 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDE1AP54750 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE1AP54750 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE1AP54750 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE1AP54750 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE1AP54750 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
PDE1AP54750 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.23■□□□□ 0.67
PDE1AP54750 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PDE1AP54750 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE1AP54750 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.23■□□□□ 0.67
PDE1AP54750 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE1AP54750 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.23■□□□□ 0.67
PDE1AP54750 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.23■□□□□ 0.67
PDE1AP54750 AL390955.2-201ENST00000603032 514 ntBASIC19.23■□□□□ 0.67
PDE1AP54750 AC074044.1-201ENST00000609673 707 ntBASIC19.23■□□□□ 0.67
PDE1AP54750 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE1AP54750 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDE1AP54750 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE1AP54750 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE1AP54750 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE1AP54750 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE1AP54750 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDE1AP54750 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDE1AP54750 AC091951.1-201ENST00000512854 2465 ntBASIC19.23■□□□□ 0.67
PDE1AP54750 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PDE1AP54750 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE1AP54750 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.22■□□□□ 0.67
PDE1AP54750 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE1AP54750 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE1AP54750 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE1AP54750 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PDE1AP54750 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.22■□□□□ 0.67
PDE1AP54750 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE1AP54750 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE1AP54750 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE1AP54750 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDE1AP54750 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE1AP54750 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.22■□□□□ 0.67
PDE1AP54750 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.22■□□□□ 0.67
PDE1AP54750 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.22■□□□□ 0.67
PDE1AP54750 AC009477.1-201ENST00000452936 217 ntBASIC19.22■□□□□ 0.67
PDE1AP54750 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.22■□□□□ 0.67
PDE1AP54750 AC092183.1-201ENST00000469884 875 ntBASIC19.22■□□□□ 0.67
PDE1AP54750 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.22■□□□□ 0.67
PDE1AP54750 SDHAP3-202ENST00000515467 728 ntBASIC19.22■□□□□ 0.67
PDE1AP54750 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.22■□□□□ 0.67
PDE1AP54750 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.22■□□□□ 0.67
PDE1AP54750 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PDE1AP54750 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE1AP54750 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
PDE1AP54750 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PDE1AP54750 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PDE1AP54750 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE1AP54750 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDE1AP54750 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE1AP54750 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDE1AP54750 AC084364.1-201ENST00000551967 1556 ntBASIC19.22■□□□□ 0.67
PDE1AP54750 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
PDE1AP54750 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.22■□□□□ 0.67
PDE1AP54750 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE1AP54750 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE1AP54750 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PDE1AP54750 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PDE1AP54750 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
PDE1AP54750 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.21■□□□□ 0.67
PDE1AP54750 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.21■□□□□ 0.67
PDE1AP54750 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PDE1AP54750 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.21■□□□□ 0.67
PDE1AP54750 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 AC055876.3-201ENST00000431496 288 ntBASIC19.21■□□□□ 0.67
PDE1AP54750 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDE1AP54750 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDE1AP54750 AC009407.1-201ENST00000568958 598 ntBASIC19.21■□□□□ 0.67
PDE1AP54750 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.21■□□□□ 0.67
PDE1AP54750 AC138649.4-201ENST00000612222 287 ntBASIC19.21■□□□□ 0.67
PDE1AP54750 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.21■□□□□ 0.67
PDE1AP54750 AC093512.1-201ENST00000617969 520 ntBASIC19.21■□□□□ 0.67
PDE1AP54750 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PDE1AP54750 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms