Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.9■□□□□ 0.3
RAD23BP54727 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.9■□□□□ 0.3
RAD23BP54727 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.9■□□□□ 0.3
RAD23BP54727 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RAD23BP54727 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 MIR770-201ENST00000390219 98 ntBASIC16.9■□□□□ 0.3
RAD23BP54727 AC074338.1-201ENST00000416825 156 ntBASIC16.9■□□□□ 0.3
RAD23BP54727 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RAD23BP54727 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.9■□□□□ 0.3
RAD23BP54727 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.9■□□□□ 0.3
RAD23BP54727 ZNF890P-202ENST00000530367 1156 ntBASIC16.9■□□□□ 0.3
RAD23BP54727 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.9■□□□□ 0.3
RAD23BP54727 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.9■□□□□ 0.3
RAD23BP54727 AC044860.1-202ENST00000559481 777 ntBASIC16.9■□□□□ 0.3
RAD23BP54727 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.9■□□□□ 0.3
RAD23BP54727 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.9■□□□□ 0.3
RAD23BP54727 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.9■□□□□ 0.3
RAD23BP54727 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RAD23BP54727 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.9■□□□□ 0.3
RAD23BP54727 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.9■□□□□ 0.3
RAD23BP54727 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RAD23BP54727 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.9■□□□□ 0.3
RAD23BP54727 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RAD23BP54727 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.89■□□□□ 0.3
RAD23BP54727 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.89■□□□□ 0.3
RAD23BP54727 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.89■□□□□ 0.3
RAD23BP54727 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
RAD23BP54727 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.89■□□□□ 0.29
RAD23BP54727 Z97205.2-201ENST00000564697 1639 ntBASIC16.89■□□□□ 0.29
RAD23BP54727 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.89■□□□□ 0.29
RAD23BP54727 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
RAD23BP54727 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.89■□□□□ 0.29
RAD23BP54727 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RAD23BP54727 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.89■□□□□ 0.29
RAD23BP54727 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.89■□□□□ 0.29
RAD23BP54727 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.89■□□□□ 0.29
RAD23BP54727 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 BASP1P1-201ENST00000430708 665 ntBASIC16.89■□□□□ 0.29
RAD23BP54727 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.89■□□□□ 0.29
RAD23BP54727 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.89■□□□□ 0.29
RAD23BP54727 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.89■□□□□ 0.29
RAD23BP54727 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.89■□□□□ 0.29
RAD23BP54727 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.89■□□□□ 0.29
RAD23BP54727 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.89■□□□□ 0.29
RAD23BP54727 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.89■□□□□ 0.29
RAD23BP54727 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.89■□□□□ 0.29
RAD23BP54727 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.89■□□□□ 0.29
RAD23BP54727 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.89■□□□□ 0.29
RAD23BP54727 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
RAD23BP54727 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD23BP54727 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.89■□□□□ 0.29
RAD23BP54727 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAD23BP54727 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.88■□□□□ 0.29
RAD23BP54727 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.88■□□□□ 0.29
RAD23BP54727 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RAD23BP54727 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.88■□□□□ 0.29
RAD23BP54727 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms