Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.95■□□□□ 0.14
LIMK2P53671 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.95■□□□□ 0.14
LIMK2P53671 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LIMK2P53671 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.95■□□□□ 0.14
LIMK2P53671 AC097493.3-201ENST00000509725 367 ntBASIC15.95■□□□□ 0.14
LIMK2P53671 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.95■□□□□ 0.14
LIMK2P53671 MIR4453-201ENST00000584019 89 ntBASIC15.95■□□□□ 0.14
LIMK2P53671 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.95■□□□□ 0.14
LIMK2P53671 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.95■□□□□ 0.14
LIMK2P53671 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.95■□□□□ 0.14
LIMK2P53671 AL390754.1-201ENST00000619088 582 ntBASIC15.95■□□□□ 0.14
LIMK2P53671 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.95■□□□□ 0.14
LIMK2P53671 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.95■□□□□ 0.14
LIMK2P53671 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
LIMK2P53671 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LIMK2P53671 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LIMK2P53671 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.95■□□□□ 0.14
LIMK2P53671 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.95■□□□□ 0.14
LIMK2P53671 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 AC009090.5-201ENST00000624886 2285 ntBASIC15.94■□□□□ 0.14
LIMK2P53671 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.94■□□□□ 0.14
LIMK2P53671 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.94■□□□□ 0.14
LIMK2P53671 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
LIMK2P53671 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.94■□□□□ 0.14
LIMK2P53671 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LIMK2P53671 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.94■□□□□ 0.14
LIMK2P53671 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.94■□□□□ 0.14
LIMK2P53671 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.94■□□□□ 0.14
LIMK2P53671 TSPY16P-201ENST00000449843 468 ntBASIC15.94■□□□□ 0.14
LIMK2P53671 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.94■□□□□ 0.14
LIMK2P53671 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.94■□□□□ 0.14
LIMK2P53671 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.94■□□□□ 0.14
LIMK2P53671 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 AC112693.3-201ENST00000624819 1983 ntBASIC15.94■□□□□ 0.14
LIMK2P53671 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
LIMK2P53671 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.94■□□□□ 0.14
LIMK2P53671 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.94■□□□□ 0.14
LIMK2P53671 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LIMK2P53671 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK2P53671 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.94■□□□□ 0.14
LIMK2P53671 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.93■□□□□ 0.14
LIMK2P53671 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.93■□□□□ 0.14
LIMK2P53671 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.93■□□□□ 0.14
LIMK2P53671 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.93■□□□□ 0.14
LIMK2P53671 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.93■□□□□ 0.14
LIMK2P53671 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LIMK2P53671 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LIMK2P53671 AC004987.2-201ENST00000395959 1148 ntBASIC15.93■□□□□ 0.14
LIMK2P53671 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.93■□□□□ 0.14
LIMK2P53671 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.93■□□□□ 0.14
LIMK2P53671 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.93■□□□□ 0.14
LIMK2P53671 AL512638.1-201ENST00000457493 794 ntBASIC15.93■□□□□ 0.14
LIMK2P53671 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.93■□□□□ 0.14
LIMK2P53671 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.93■□□□□ 0.14
LIMK2P53671 RARRES2P9-201ENST00000565168 469 ntBASIC15.93■□□□□ 0.14
LIMK2P53671 MIR4313-201ENST00000580760 101 ntBASIC15.93■□□□□ 0.14
LIMK2P53671 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.93■□□□□ 0.14
LIMK2P53671 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.93■□□□□ 0.14
LIMK2P53671 AC018529.1-201ENST00000613063 361 ntBASIC15.93■□□□□ 0.14
LIMK2P53671 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.93■□□□□ 0.14
LIMK2P53671 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
LIMK2P53671 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LIMK2P53671 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms