Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 C1QBPP1-201ENST00000400117 770 ntBASIC15.55■□□□□ 0.08
LIMK1P53667 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.55■□□□□ 0.08
LIMK1P53667 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.55■□□□□ 0.08
LIMK1P53667 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.55■□□□□ 0.08
LIMK1P53667 LDHBP1-201ENST00000455730 1119 ntBASIC15.55■□□□□ 0.08
LIMK1P53667 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK1P53667 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.55■□□□□ 0.08
LIMK1P53667 AC120045.2-201ENST00000567334 178 ntBASIC15.55■□□□□ 0.08
LIMK1P53667 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK1P53667 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK1P53667 AL049840.4-201ENST00000602422 811 ntBASIC15.55■□□□□ 0.08
LIMK1P53667 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK1P53667 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK1P53667 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
LIMK1P53667 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK1P53667 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK1P53667 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK1P53667 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK1P53667 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK1P53667 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK1P53667 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.54■□□□□ 0.08
LIMK1P53667 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LIMK1P53667 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LIMK1P53667 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.54■□□□□ 0.08
LIMK1P53667 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 KRT8P19-201ENST00000551916 1455 ntBASIC15.54■□□□□ 0.08
LIMK1P53667 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.54■□□□□ 0.08
LIMK1P53667 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.54■□□□□ 0.08
LIMK1P53667 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.54■□□□□ 0.08
LIMK1P53667 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.54■□□□□ 0.08
LIMK1P53667 AC005077.2-201ENST00000449786 690 ntBASIC15.54■□□□□ 0.08
LIMK1P53667 AL591846.1-201ENST00000451736 433 ntBASIC15.54■□□□□ 0.08
LIMK1P53667 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.54■□□□□ 0.08
LIMK1P53667 AC106760.1-201ENST00000508690 800 ntBASIC15.54■□□□□ 0.08
LIMK1P53667 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.54■□□□□ 0.08
LIMK1P53667 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.54■□□□□ 0.08
LIMK1P53667 MIR4706-201ENST00000582134 82 ntBASIC15.54■□□□□ 0.08
LIMK1P53667 AC020914.3-201ENST00000594712 304 ntBASIC15.54■□□□□ 0.08
LIMK1P53667 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.54■□□□□ 0.08
LIMK1P53667 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.54■□□□□ 0.08
LIMK1P53667 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.54■□□□□ 0.08
LIMK1P53667 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.54■□□□□ 0.08
LIMK1P53667 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK1P53667 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.53■□□□□ 0.08
LIMK1P53667 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LIMK1P53667 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LIMK1P53667 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LIMK1P53667 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
LIMK1P53667 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.53■□□□□ 0.08
LIMK1P53667 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.53■□□□□ 0.08
LIMK1P53667 RN7SL769P-201ENST00000469386 295 ntBASIC15.53■□□□□ 0.08
LIMK1P53667 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.53■□□□□ 0.08
LIMK1P53667 TMEM198B-204ENST00000484016 896 ntBASIC15.53■□□□□ 0.08
LIMK1P53667 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.53■□□□□ 0.08
LIMK1P53667 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.53■□□□□ 0.08
LIMK1P53667 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LIMK1P53667 MIR3619-201ENST00000579667 83 ntBASIC15.53■□□□□ 0.08
LIMK1P53667 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.53■□□□□ 0.08
LIMK1P53667 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.53■□□□□ 0.08
LIMK1P53667 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.53■□□□□ 0.08
LIMK1P53667 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LIMK1P53667 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LIMK1P53667 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.53■□□□□ 0.08
LIMK1P53667 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIMK1P53667 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms