Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CLCN2P51788 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.38■□□□□ 0.05
CLCN2P51788 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLCN2P51788 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN2P51788 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN2P51788 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CLCN2P51788 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CLCN2P51788 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN2P51788 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.37■□□□□ 0.05
CLCN2P51788 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN2P51788 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN2P51788 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN2P51788 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLCN2P51788 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.37■□□□□ 0.05
CLCN2P51788 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN2P51788 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.37■□□□□ 0.05
CLCN2P51788 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
CLCN2P51788 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 AC009093.7-201ENST00000623853 1223 ntBASIC15.37■□□□□ 0.05
CLCN2P51788 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CLCN2P51788 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CLCN2P51788 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
CLCN2P51788 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN2P51788 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN2P51788 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN2P51788 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLCN2P51788 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN2P51788 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CLCN2P51788 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN2P51788 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN2P51788 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN2P51788 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CLCN2P51788 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN2P51788 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
CLCN2P51788 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN2P51788 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN2P51788 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN2P51788 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CLCN2P51788 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLCN2P51788 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.36■□□□□ 0.05
CLCN2P51788 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN2P51788 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.36■□□□□ 0.05
CLCN2P51788 LINC01225-203ENST00000563550 1244 ntBASIC15.36■□□□□ 0.05
CLCN2P51788 AC004449.1-201ENST00000564240 433 ntBASIC15.36■□□□□ 0.05
CLCN2P51788 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.36■□□□□ 0.05
CLCN2P51788 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.36■□□□□ 0.05
CLCN2P51788 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN2P51788 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN2P51788 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLCN2P51788 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CLCN2P51788 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLCN2P51788 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN2P51788 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms