Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC34P49427 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
CDC34P49427 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.55□□□□□ -0.4
CDC34P49427 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CDC34P49427 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC34P49427 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.55□□□□□ -0.4
CDC34P49427 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
CDC34P49427 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CDC34P49427 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC34P49427 AC104076.2-201ENST00000448912 469 ntBASIC12.55□□□□□ -0.4
CDC34P49427 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC34P49427 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.55□□□□□ -0.4
CDC34P49427 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.55□□□□□ -0.4
CDC34P49427 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.55□□□□□ -0.4
CDC34P49427 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.55□□□□□ -0.4
CDC34P49427 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC34P49427 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 AC099336.1-202ENST00000602961 463 ntBASIC12.55□□□□□ -0.4
CDC34P49427 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.55□□□□□ -0.4
CDC34P49427 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CDC34P49427 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CDC34P49427 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC34P49427 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.55□□□□□ -0.4
CDC34P49427 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC34P49427 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
CDC34P49427 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC34P49427 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDC34P49427 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC34P49427 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.55□□□□□ -0.4
CDC34P49427 WASH6P-202ENST00000359512 1437 ntBASIC12.54□□□□□ -0.4
CDC34P49427 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
CDC34P49427 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CDC34P49427 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.54□□□□□ -0.4
CDC34P49427 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CDC34P49427 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 RCN1P1-201ENST00000400413 996 ntBASIC12.54□□□□□ -0.4
CDC34P49427 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
CDC34P49427 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.54□□□□□ -0.4
CDC34P49427 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.54□□□□□ -0.4
CDC34P49427 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.54□□□□□ -0.4
CDC34P49427 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CDC34P49427 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.54□□□□□ -0.4
CDC34P49427 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.54□□□□□ -0.4
CDC34P49427 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CDC34P49427 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CDC34P49427 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDC34P49427 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CDC34P49427 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDC34P49427 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC34P49427 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CDC34P49427 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CDC34P49427 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC34P49427 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CDC34P49427 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC34P49427 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
CDC34P49427 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.53□□□□□ -0.4
CDC34P49427 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms