Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC126755.4-201ENST00000549796 1459 ntBASIC18.51■□□□□ 0.55
NEDD4P46934 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
NEDD4P46934 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.51■□□□□ 0.55
NEDD4P46934 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEDD4P46934 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NEDD4P46934 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NEDD4P46934 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.5■□□□□ 0.55
NEDD4P46934 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.5■□□□□ 0.55
NEDD4P46934 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.5■□□□□ 0.55
NEDD4P46934 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.5■□□□□ 0.55
NEDD4P46934 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.5■□□□□ 0.55
NEDD4P46934 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEDD4P46934 SPDYE22P-201ENST00000582158 798 ntBASIC18.5■□□□□ 0.55
NEDD4P46934 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEDD4P46934 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEDD4P46934 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
NEDD4P46934 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEDD4P46934 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEDD4P46934 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NEDD4P46934 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
NEDD4P46934 AC136621.1-201ENST00000624017 2304 ntBASIC18.5■□□□□ 0.55
NEDD4P46934 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
NEDD4P46934 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEDD4P46934 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
NEDD4P46934 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NEDD4P46934 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.5■□□□□ 0.55
NEDD4P46934 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NEDD4P46934 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEDD4P46934 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.5■□□□□ 0.55
NEDD4P46934 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NEDD4P46934 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NEDD4P46934 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NEDD4P46934 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEDD4P46934 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEDD4P46934 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.49■□□□□ 0.55
NEDD4P46934 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.49■□□□□ 0.55
NEDD4P46934 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 AL035633.1-201ENST00000406139 838 ntBASIC18.49■□□□□ 0.55
NEDD4P46934 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.49■□□□□ 0.55
NEDD4P46934 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NEDD4P46934 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.49■□□□□ 0.55
NEDD4P46934 AC000095.1-201ENST00000603208 874 ntBASIC18.49■□□□□ 0.55
NEDD4P46934 LINC02084-201ENST00000606069 1096 ntBASIC18.49■□□□□ 0.55
NEDD4P46934 AC099568.2-201ENST00000609194 695 ntBASIC18.49■□□□□ 0.55
NEDD4P46934 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.49■□□□□ 0.55
NEDD4P46934 AC007431.3-201ENST00000623221 587 ntBASIC18.49■□□□□ 0.55
NEDD4P46934 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NEDD4P46934 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NEDD4P46934 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.49■□□□□ 0.55
NEDD4P46934 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.49■□□□□ 0.55
NEDD4P46934 AC144831.1-201ENST00000573312 2656 ntBASIC18.49■□□□□ 0.55
NEDD4P46934 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.49■□□□□ 0.55
NEDD4P46934 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.49■□□□□ 0.55
NEDD4P46934 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.49■□□□□ 0.55
NEDD4P46934 AL133267.1-201ENST00000398220 340 ntBASIC18.49■□□□□ 0.55
NEDD4P46934 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.49■□□□□ 0.55
NEDD4P46934 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.49■□□□□ 0.55
NEDD4P46934 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.49■□□□□ 0.55
NEDD4P46934 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.49■□□□□ 0.55
NEDD4P46934 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEDD4P46934 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.48■□□□□ 0.55
NEDD4P46934 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEDD4P46934 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.48■□□□□ 0.55
NEDD4P46934 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.48■□□□□ 0.55
NEDD4P46934 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.48■□□□□ 0.55
NEDD4P46934 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEDD4P46934 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEDD4P46934 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms