Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.67■□□□□ 0.26
RFC1P35251 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.67■□□□□ 0.26
RFC1P35251 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
RFC1P35251 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 FO393414.2-201ENST00000405153 598 ntBASIC16.67■□□□□ 0.26
RFC1P35251 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.67■□□□□ 0.26
RFC1P35251 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.67■□□□□ 0.26
RFC1P35251 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.67■□□□□ 0.26
RFC1P35251 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RFC1P35251 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RFC1P35251 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.67■□□□□ 0.26
RFC1P35251 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.67■□□□□ 0.26
RFC1P35251 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.67■□□□□ 0.26
RFC1P35251 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.67■□□□□ 0.26
RFC1P35251 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 AC126177.1-201ENST00000547829 2218 ntBASIC16.66■□□□□ 0.26
RFC1P35251 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.66■□□□□ 0.26
RFC1P35251 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.66■□□□□ 0.26
RFC1P35251 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RFC1P35251 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RFC1P35251 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.66■□□□□ 0.26
RFC1P35251 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RFC1P35251 MST1L-201ENST00000442552 2185 ntBASIC16.66■□□□□ 0.26
RFC1P35251 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.66■□□□□ 0.26
RFC1P35251 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.66■□□□□ 0.26
RFC1P35251 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.66■□□□□ 0.26
RFC1P35251 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.66■□□□□ 0.26
RFC1P35251 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RFC1P35251 AC004449.1-201ENST00000564240 433 ntBASIC16.66■□□□□ 0.26
RFC1P35251 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.66■□□□□ 0.26
RFC1P35251 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.66■□□□□ 0.26
RFC1P35251 AL589739.1-201ENST00000607720 493 ntBASIC16.66■□□□□ 0.26
RFC1P35251 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.66■□□□□ 0.26
RFC1P35251 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.66■□□□□ 0.26
RFC1P35251 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.66■□□□□ 0.26
RFC1P35251 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.66■□□□□ 0.26
RFC1P35251 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 TUBB3P1-201ENST00000405796 1332 ntBASIC16.66■□□□□ 0.26
RFC1P35251 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC1P35251 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RFC1P35251 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 AL607033.1-201ENST00000623900 1599 ntBASIC16.65■□□□□ 0.26
RFC1P35251 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.65■□□□□ 0.26
RFC1P35251 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.65■□□□□ 0.26
RFC1P35251 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.65■□□□□ 0.26
RFC1P35251 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
RFC1P35251 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RFC1P35251 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 RPL37AP1-201ENST00000412502 279 ntBASIC16.65■□□□□ 0.26
RFC1P35251 AC136604.1-201ENST00000418535 575 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms