Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SHC1P29353 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SHC1P29353 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SHC1P29353 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
SHC1P29353 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SHC1P29353 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SHC1P29353 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SHC1P29353 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 AC023157.3-201ENST00000619086 2088 ntBASIC14.53□□□□□ -0.08
SHC1P29353 AC134407.2-201ENST00000625089 1978 ntBASIC14.53□□□□□ -0.08
SHC1P29353 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHC1P29353 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHC1P29353 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.52□□□□□ -0.08
SHC1P29353 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHC1P29353 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SHC1P29353 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHC1P29353 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHC1P29353 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHC1P29353 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHC1P29353 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.52□□□□□ -0.08
SHC1P29353 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHC1P29353 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.52□□□□□ -0.08
SHC1P29353 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHC1P29353 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SHC1P29353 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHC1P29353 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SHC1P29353 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SHC1P29353 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SHC1P29353 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHC1P29353 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHC1P29353 MIR648-201ENST00000385046 94 ntBASIC14.52□□□□□ -0.09
SHC1P29353 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SHC1P29353 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SHC1P29353 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.52□□□□□ -0.09
SHC1P29353 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.52□□□□□ -0.09
SHC1P29353 HAUS4P1-201ENST00000406739 1145 ntBASIC14.52□□□□□ -0.09
SHC1P29353 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.52□□□□□ -0.09
SHC1P29353 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.52□□□□□ -0.09
SHC1P29353 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHC1P29353 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.52□□□□□ -0.09
SHC1P29353 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.52□□□□□ -0.09
SHC1P29353 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.52□□□□□ -0.09
SHC1P29353 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHC1P29353 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.52□□□□□ -0.09
SHC1P29353 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.52□□□□□ -0.09
SHC1P29353 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.52□□□□□ -0.09
SHC1P29353 RN7SL828P-201ENST00000607615 303 ntBASIC14.52□□□□□ -0.09
SHC1P29353 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHC1P29353 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.52□□□□□ -0.09
SHC1P29353 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.52□□□□□ -0.09
SHC1P29353 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHC1P29353 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.52□□□□□ -0.09
SHC1P29353 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.52□□□□□ -0.09
SHC1P29353 AC068587.6-202ENST00000641839 5619 ntBASIC14.52□□□□□ -0.09
SHC1P29353 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.52□□□□□ -0.09
SHC1P29353 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.52□□□□□ -0.09
SHC1P29353 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SHC1P29353 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
SHC1P29353 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.52□□□□□ -0.09
SHC1P29353 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHC1P29353 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHC1P29353 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHC1P29353 AC067930.6-201ENST00000623257 4947 ntBASIC14.52□□□□□ -0.09
SHC1P29353 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.52□□□□□ -0.09
SHC1P29353 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.51□□□□□ -0.09
SHC1P29353 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.51□□□□□ -0.09
SHC1P29353 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
SHC1P29353 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SHC1P29353 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SHC1P29353 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.51□□□□□ -0.09
SHC1P29353 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SHC1P29353 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 AL691432.1-201ENST00000596308 1422 ntBASIC14.51□□□□□ -0.09
SHC1P29353 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SHC1P29353 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SHC1P29353 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.51□□□□□ -0.09
SHC1P29353 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 TREML5P-201ENST00000421694 576 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms